Potential of Pinus eldarica Medw. tree bark for biomonitoring polycyclic aromatic hydrocarbons in ambient air.

Urban trees' biomonitoring of pollutants such as polycyclic aromatic hydrocarbons (PAHs) yields pertinent and useful data for air pollution management. The aim of this study was to biomonitor PAHs in pine (Pinus eldarica Medw.) trees in the city of Isfahan and identify their sources. In total, 34 samples of outer bark of the trees were collected and their contents of 16 EPA PAHs were analyzed. With a median value of 136.3 ng/g, the total PAH contents in tree barks varied from 53.4 to 705.2 ng/g. The average values of the diagnostic ratios for Ant/(Ant + Phe), Flu/(Flu + Py), BaA/(BaA + Chr) and IP/(IP + BP) were 0.19, 0.49, 0.45 and 0.49, respectively, revealing the PAHs majority source of pyrogenic. Meanwhile, principal component analysis showed two major types of PAHs sources including pyrogenic (fossil fuel combustion and industrial activities) and petrogenic (uncombusted) sources. The average ratio An/(An + Phe) and Flu/(Flu + Py) in bark samples was close to their relevant ratios in ambient air which demonstrated the potential use of this approach for biomonitoring of PAHs.

Female biased adult sex ratio in the Bronze Age cemetery of Shahr-i Sokhta (Iran) as an indicator of long distance trade and matrilocality.

OBJECTIVES: This paper starts from the unusual observation of the overrepresentation of females among adults in the cemetery of Bronze Age Shahr-i Sokhta (Seistan, Iran) and explores the post marital residence pattern. By integrating taphonomical (skeletal preservation), anthropological (sex ratio [SR], sexual dimorphism, stress indicators, age at death), archeological (long distance trade indicators, habitation floor area, social role of women), and ancient DNA (heterozygosity levels in X chromosomes) data we test the hypothesis of post marital matrilocality in the site. METHODS: We computed the SR (pelvis-based sex determination) in a random unpublished adult sample from the cemetery of Shahr-i Sokhta and in two samples previously published by other authors. We used comparative data on SR from: a large Supra Regional multi-chronological sample of sites, n = 47, with 8808 adult sexed individuals, from Southern Europe, Egypt, Middle East, Southern Russia; a Regional Bronze Age sample of sites (n = 10) from Bactria Margiana and Indus Valley with 1324 adult sexed individuals. We estimated the heterozygosity levels in X chromosomes compared with the rest of the autosomes on the assumption that in a matrilocal society females should show lower variability than men. RESULTS: Adult SR in a sample (n = 549) from Shahr-i Sokhta is 70.5, the overrepresentation of females is shared with Regional Bronze Age sites from Bactria Margiana (SR = 72.09) and Indus Valley (SR = 67.54). On the contrary, in a larger Supra Regional multi-chronological sample of sites, mean SR ranges between 112.7 (Bronze Age) and 163.1 (Middle Ages). Taphonomical and anthropological indicators do not explain the overrepresentation of female skeletons. Archeological indicators suggest a high social status of women and that the society was devoted to long range trade activities. heterozygosity levels in X chromosomes are in agreement with a matrilocal society. CONCLUSIONS: Indicators suggest that Bronze Age Shahr-ì Sokhta was a matrilocal society and that long distance trade was an important economic factor producing an overrepresentation of adult female skeletons in the cemetery.

Abnormal findings in fetal echocardiography and maternal disease: A cross-sectional study.

Background: Congenital cardiovascular malformation is the most common group of birth defects. Fetal echocardiography is highly sensitive and specific in the diagnosis of congenital heart disease in low- and high-risk populations. Objective: This study aimed to assess abnormal findings in fetal echocardiography and maternal disease. Materials and Methods: This cross-sectional study was performed on 114 pregnant women referred to Afshar hospital, Yazd, Iran from October 2016 to March 2017. All pregnant women underwent fetal echocardiography through fetal heart screening protocol, which is administered by the international society of ultrasound in obstetrics and gynecology guidelines. Data collected included referral cause, gestational age, maternal age, gravida, and final diagnosis after an accurate fetal echocardiography. Results: The mean gestational age was 20 wk. The most common referral cause of pregnant women included diabetes (36.8%), fetal arrhythmia (14%), high maternal age (7%), and echogenic focus on ultrasound (6.1%). The most common postpartum findings were normal (68.4%), cardiac abnormalities (17.6%), and arrhythmias (14%). In postnatal echocardiography, the results were consistent with fetal echocardiography except in 2 women. Conclusion: This study showed that fetal echocardiography can be used in the early diagnosis and treatment of congenital heart diseases.

Seasonal trend and source identification of polycyclic aromatic hydrocarbons associated with fine particulate matters (PM2.5) in Isfahan City, Iran, using diagnostic ratio and PMF model.

Particulate matters (PMs) and their associated chemical compounds such as polycyclic aromatic hydrocarbons (PAHs) are important factors to evaluate air pollution and its health impacts particularly in developing countries. Source identification of these compounds can be used for air quality management. The aim of this study was to identify the sources of PM2.5-bound PAHs in Isfahan city, a metropolitan and industrialized area in central Iran. The PM2.5 samples were collected at 50 sites during 1 year. Source identification and apportionment of particle-bound PAHs were carried out using diagnostic ratios (DRs) of PAHs and positive matrix factorization (PMF) model. The results showed that the concentrations of PM2.5 ranged from 8 to 291 µg/m3 with an average of 60.2 ± 53.9 µg/m3, whereas the sum of concentrations of the 19 PAH compounds (Æ©PAHs) ranged from 0.3 to 61.4 ng/m3 with an average of 4.65 ± 8.54 ng/m3. The PAH compounds showed their highest and lowest concentrations occurred in cold and warm seasons, respectively. The mean concentration of benzo[a]pyrene (1.357 ng m-3) in December-January, when inversion occured, was higher than the Iranian national standard value showing the risk of exposure to PM2.5-bound PAHs. Applying DRs suggested that the sources of the PAHs were mainly from fuel combustion. The main sources identified by the PMF model were gasoline combustion (23.8 to 33.1%) followed by diesel combustion (20.6 to 24.8%), natural gas combustion (9.5 to 28.4%), evaporative-uncombusted (9.5 to 23.0%), industrial activities (8.4 to 13.5%), and unknown sources (2.8 to 15.7%). It is concluded that transportation, industrial activities, and combustion of natural gas (both in residential-commercial and industrial sectors) as the main sources of PAHs in PM2.5 should be managed in the metropolitan area, particularly in cold seasons.

Bioaccumulation of heavy metals in Stachys inflata and Scariola orientalis affected by particulate matters of a cement factory in central Iran.

Industrial activities can affect accumulation of pollutants (e.g., heavy metals (HMs)) by plants and influence their entrance to the food chain. This research was carried out on accumulation of HMs including chromium (Cr), lead (Pb), and zinc (Zn) by two plants Stachys inflata and Scariola orientalis grown in natural grasslands in vicinity of a national park where they are influenced by dispersion of particulate matter (PM) through Sarooj Cement Factory in central Iran. The PM spatial dispersion of the factory was determined using the AERMOD model. Soil and vegetation samples were collected based on the modeled PM levels to analyze their HM contents. Bioconcentration factor (BCF) and transfer factor (TF) from root to shoot were determined in two widespread plants of the region: Stachys inflata and Scariola orientalis. The mean concentration of HMs in the soil samples was as follows: Zn (145.39 mg/kg) > Pb (78.52 mg/kg) > Cr (32.69 mg/kg) which was significantly correlated with simulated PM concentrations. This indicated the common source and distribution pattern of HMs which affected their accumulation in plants. TF and BCF values of the HMs were higher in Scariola orientalis than those of Stachys inflata, especially for Cr showing potentially higher risk to enter the food chain. The results showed that HM concentration in the soil as well as their accumulation by plants were correlated with the simulated PM deposition and not with linear distance from the factory.

Study of antioxidant activity and some herbal compounds of Dracocephalum kotschyi Boiss. in different ages of growth.

OBJECTIVE: Dracocephalum kotschyi Boiss is one of eight species of Dracocephalum, an endemic species of Iran, and grows in areas such as Isfahan, Yasuj, Mazandaran, and Tabriz. The present study was designed to analyze the antioxidant, phenol and flavonoids contents of this plant under different conditions of cultivation in a completely randomized, factorial design. MATERIALS AND METHODS: Shrubs of different ages (two, three, and six) in cultivated rangeland collected from three randomly plant at the end of May 2018 simultaneously with the flowering time. Antioxidant activity of methanolic extract of plant samples were evaluated with DPPH method. Total phenolic compounds and the total content of flavonoids were measured using the Folin Sioukhlu and aluminum chloride methods respectively. RESULTS: The result showed that there was a significant effect of planting time, plant organs and interaction of time and organ on the total antioxidant capacity and total phenol and flavonoids contents. The highest antioxidant activity, total phenol, and total flavonoid have belonged to the flower of six age plants. The highest antioxidant activity, total phenol, and total flavonoid have belonged to the flower of six age. The highest level of antioxidant activity with IC50 15.8489 ±â€¯0.001 µg/ml belonged to the flower of the two-year-old plant, which has a stronger antioxidant activity than the BHT standard with 19.95 µg/ml. CONCLUSION: But in general, it can be said that the six-year-old plant with the highest antioxidant capacity, phenolic, and flavonoid compounds is the best age and mainly flower organ is preferred.

The importance of various stages of succession in preservation of biodiversity among riparian birds in northern Iran.

Every stage of succession may provide certain species with habitat requirements which are impossible in other stages of succession. This study attempts to evaluate the different stages of succession in terms of composition and structure of bird populations in Hyrcanian forests. Bird-habitat relationships were investigated by comparing vegetation characteristics in three successional stages including late, initial stage, and urban areas. Bird richness, diversity, and abundance were measured within a 25-m radius of each of the 120 sampling points in various stages of succession and urban areas from May to April (2014) in the Ziarat catchment. This study indicated that every stage of succession may support certain species. Based on bird-habitat associations along the various stages of succession, two groups were distinguished. Conventional comparative analysis separated two groups of understory birds: interior specialists and edge specialists. The interior-specialist group was positively correlated with the number of dead trees, tall trees with high values of dbh and height and canopy cover. In contrast, edge specialists groups mainly included terrestrial insectivores and were positively correlated with open area and shrub cover, and percentage of shrub cover between 1 and 2 m in height. In summary, bird communities in Hyrcanian forests are highly dynamic in different vegetation covers suggesting that it is critical to increase diverse and abundant bird populations by conserving forests composed of mosaics of differently disturbed stands and mature forest patches.

Explaining the Relation between Nutrition and Room Temperature Based on Iranian Medicine.

BACKGROUND: Nutrition is one of the most effective components of human's health and nutritional practices have an important role in a healthy nutrition. Iranian traditional medicine, which is one of the holistic medical schools, has special approaches related to effective environmental factors in healthy nutrition. Identifying these special approaches is helpful to the medical community. The aim of this study was to examine the relation between nutrition and room temperature during different seasons based on Iranian traditional medicine. To that end, its precise scientific aspects and the approach of the traditional medicine practitioners was analyzed to provide a new pattern in nutrition with respect to the weather. METHODS: Traditional medicine literature including Ibn-e Sina's Qanoon, Zakhirey-e Kharazm shahi, Kamil al-Sinaa al Tibbiya al-Maliki, mofarreh al-gholoob, Hefz o sehe Naseri, were studied. Differences and similarities were reviewed and summarized. In order to analyze the data, scientific resources of modern medicine such as Krause's food and nutrition principles were applied. RESULTS: According to traditional medicine's approaches and the new scientific findings, there are significant differences between the type of regime, quality, and quantity of meals during different seasons of a year and in different room temperatures. Considering the above-mentioned differences, it plays an important role in a healthy nutrition. CONCLUSION: Adhering to a good regime and vigilance on a healthy nutrition would provide a new pattern regime and ultimately lead to healthy people. Therefore, it is important to focus on this topic to promote a healthy society.

Overexpression of the MUC1 Gene in Iranian Women with Breast Cancer Micrometastasis.

The membrane epithelial mucin MUC1 is expressed at the luminal surface of most simple epithelial cells, but expression is greatly increased in most breast cancers. The aims of present study were to investigate expression of the MUC1 gene and interactive affects in metastases. Whole cell RNA isolation from 50 sentinel lymph nodes (SNLs) of breast cancer patients was performed using reverse transcription and real-time PCR. All patients were diagnosed with breast cancer and without metastasis, confirmed by IHC staining. The evaluation of tumor and normal samples for expression of MUC1 gene, the results were 49.1% non-expressive and 45.3% expression (Student t, p = 0.03). Also in comparison of normal breast tissue and breast cancer SLN for MUC1 gene, MUC1 negative SLNs were 75.0% (18 samples) and MUC1 positive samples were 25.0% (6 samples). Over-expression of MUC1 gene may offer a target for therapy related to progression and metastasis in women with breast cancer.

Targeting of BUB1b Gene Expression in Sentinel Lymph Node Biopsies of Invasive Breast Cancer in Iranian Female Patients.

Detection of micrometastasis in sentinel lymph nodes (SLNs) is a very useful tool for appropriate assessment of the clinical stage of disease in breast cancer patients. Early identification of clinically relevant disease could lead to early treatment or staging approaches for breast cancer patient. Micrometastases in SLNs of women with invasive breast cancer are of great significance in this context. In this study we examined SLN biopsies considered to have small numbers of cancerous cells by real time RT-PCR. All of the samples underwent immunohistochemical staining for cytokeratin for confirmation of the presence or absence of micrometastases. BUB1b expression assay of selected patients with and without metastasis showed overexpression in the former, but not in normal breast and lymph node tissue. Our results may be taken into account in the discussion about the merits of routine use of molecular assessment in pathogenetic studies of SLNs.

Functional characterization of ribosomal protein L15 from Saccharomyces cerevisiae.

In this study we provide general information on the little studied eukaryotic ribosomal protein rpL15. Saccharomyces cerevisiae has two genes, YRPL15A and YRPL15B that could potentially code for yeast rpL15 (YrpL15). YRPL15A is essential while YRPL15B is dispensable. However, a plasmid-borne copy of the YRPL15B gene, controlled by the GAL1 promoter or by the promoter controlling expression of the YRPL15A gene, can functionally complement YrpL15A in yeast cells, while the same gene controlled by the authentic promoter is inactive. Analysis of the levels of YrpL15B-mRNA in yeast cells shows that the YRPL15B gene is inactive in transcription. The function of YrpL15A is highly resilient to single and multiple amino acid substitutions. In addition, minor deletions from both the N- and C-terminal ends of YrpL15A has no effect on protein function, while addition of a C-terminal tag that could be used for detection of plasmid-encoded YrpL15A is detrimental to protein function. YrpL15A could also be replaced by the homologous protein from Arabidopsis thaliana despite almost 30% differences in the amino acid sequence, while the more closely related protein from Schizosaccharomyces pombe was inactive. The lack of function was not caused by a failure of the protein to enter the yeast nucleus.

Functional features of the C-terminal region of yeast ribosomal protein L5.

The aim of this study was to analyze the functional importance of the C-terminus of the essential yeast ribosomal protein L5 (YrpL5). Previous studies have indicated that the C-terminal region of YrpL5 forms an alpha-helix with a positively charged surface that is involved in protein-5S rRNA interaction. Formation of an YrpL5.5S rRNA complex is a prerequisite for nuclear import of YrpL5. Here we have tested the importance of the alpha-helix and the positively charged surface for YrpL5 function in Saccharomyces cerevisiae using site directed mutagenesis in combination with functional complementation. Alterations in the sequence forming the putative alpha-helix affected the functional capacity of YrpL5. However, the effect did not correlate with a decreased ability of the protein to bind to 5S rRNA as all rpL5 mutants tested were imported to the nucleus whether or not the alpha-helix or the positively charged surface were intact. The alterations introduced in the C-terminal sequence affected the growth rate of cells expressing mutant but functional forms of YrpL5. The reduced growth rate was correlated with a reduced ribosomal content per cell indicating that the alterations introduced in the C-terminus interfered with ribosome assembly.

Amino acids Thr56 and Thr58 are not essential for elongation factor 2 function in yeast.

Yeast elongation factor 2 is an essential protein that contains two highly conserved threonine residues, T56 and T58, that could potentially be phosphorylated by the Rck2 kinase in response to environmental stress. The importance of residues T56 and T58 for elongation factor 2 function in yeast was studied using site directed mutagenesis and functional complementation. Mutations T56D, T56G, T56K, T56N and T56V resulted in nonfunctional elongation factor 2 whereas mutated factor carrying point mutations T56M, T56C, T56S, T58S and T58V was functional. Expression of mutants T56C, T56S and T58S was associated with reduced growth rate. The double mutants T56M/T58W and T56M/T58V were also functional but the latter mutant caused increased cell death and considerably reduced growth rate. The results suggest that the physiological role of T56 and T58 as phosphorylation targets is of little importance in yeast under standard growth conditions. Yeast cells expressing mutants T56C and T56S were less able to cope with environmental stress induced by increased growth temperatures. Similarly, cells expressing mutants T56M and T56M/T58W were less capable of adapting to increased osmolarity whereas cells expressing mutant T58V behaved normally. All mutants tested were retained their ability to bind to ribosomes in vivo. However, mutants T56D, T56G and T56K were under-represented on the ribosome, suggesting that these nonfunctional forms of elongation factor 2 were less capable of competing with wild-type elongation factor 2 in ribosome binding. The presence of nonfunctional but ribosome binding forms of elongation factor 2 did not affect the growth rate of yeast cells also expressing wild-type elongation factor 2.